BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031H12LP1|AL429489
(903 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig784 1708 0.0
>3x_Contig784
Length = 1678
Score = 1708 bits (858), Expect = 0.0
Identities = 873/882 (98%)
Strand = Plus / Minus
Query: 22 gtgaaaagtacccaattccakacttcccacctttcaaggccatcatcaacaacattccat 81
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1523 gtgaagagtacccaattccagacttcccacctttcaaggccatcatcaacaacattccat 1464
Query: 82 gggatattacagaaattggtatccaacagtgggttgaagacggtttgaataaggwaggtg 141
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1463 gggatattacagaaattggtatccaacagtgggttgaagacggtttgaataaggaaggtg 1404
Query: 142 ctgtcttggaagttatggctccaagacacccggacaacgatagacttaagggtatggcct 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1403 ctgtcttggaagttatggctccaagacacccggacaacgatagacttaagggtatggcct 1344
Query: 202 ttgttacattcaacgaacgttctgatttggagaaggctttgacctttagttcgtccaagt 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1343 ttgttacattcaacgaacgttctgatttggagaaggctttgacctttagttcgtccaagt 1284
Query: 262 taaatgatcgtwccgtttacgtttctgttgctgcgccaagaagcaactacggtggtcgtt 321
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1283 taaatgatcgtaccgtttacgtttctgttgctgcgccaagaagcaactacggtggtcgtt 1224
Query: 322 ccaacttcgatgatatkgactggtccggtgccagaggttccaacttcagggagggtggaa 381
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1223 ccaacttcgatgatatggactggtccggtgccagaggttccaacttcagggagggtggaa 1164
Query: 382 gagaggccggcccagaaccagattggtccgctgctaggggttctaacttcagagaatcta 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 gagaggccggcccagaaccagattggtccgctgctaggggttctaacttcagagaatcta 1104
Query: 442 gaactagggaagctggtctagaaccagattggtcttctgctagaggctccaatttcagag 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 gaactagggaagctggtctagaaccagattggtcttctgctagaggctccaatttcagag 1044
Query: 502 aaccaagagaaccaagagagcctgtycctgaaccagattggtcttctgctagaggttctc 561
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1043 aaccaagagaaccaagagagcctgtccctgaaccagattggtcttctgctagaggttctc 984
Query: 562 atttcagagaagctagagagccaagagagccaagagagcctgttgcagaaccagattgga 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 atttcagagaagctagagagccaagagagccaagagagcctgttgcagaaccagattgga 924
Query: 622 cttctgctagaggttcccactttaaggaagccagagaaccaagagaagctgttccagaac 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 cttctgctagaggttcccactttaaggaagccagagaaccaagagaagctgttccagaac 864
Query: 682 cagattggtcttctgccagaggttcccacttcaaggaaagttaaccaagagctccagaac 741
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 863 cagattggtcttctgccagaggttcccacttcaaggaaagtaaaccaagagctccagaac 804
Query: 742 cagactggtcttctgctagaggctcccatttcagagaccaaaaaccaagaagccctgaac 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 cagactggtcttctgctagaggctcccatttcagagaccaaaaaccaagaagccctgaac 744
Query: 802 cagactggtctgatgccagaggttctcacttcaaggaatcaaaacaaagaggtcctgata 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 cagactggtctgatgccagaggttctcacttcaaggaatcaaaacaaagaggtcctgata 684
Query: 862 tcgactggtccgctgccagaggcaccaaattcggtagamaat 903
|||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 683 tcgactggtccgctgcaagaggcaccaaattcggtagacaat 642
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5410
Number of Sequences: 1807
Number of extensions: 5410
Number of successful extensions: 78
Number of sequences better than 1.0e-20: 1
length of query: 903
length of database: 10,358,551
effective HSP length: 16
effective length of query: 887
effective length of database: 10,329,639
effective search space: 9162389793
effective search space used: 9162389793
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)